.FASTA 文件扩展名

FASTA Sequence File

开发者 David J. Lipman and William R. Pearson
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什么是 FASTA 文件?

A FASTA file contains a record of nucleic acid sequences (such as DNA sequences) or protein sequences saved in the text-based FASTA format. It may store one or multiple sequences, which is why FASTA is sometimes referred to as the FASTA database format. Users can view and analyze FASTA files with DNA analysis software.

更多信息

在 GSL Biotech SnapGene 6 中打开的 .fasta 文件截图
在 GSL Biotech SnapGene 6 中打开的 FASTA 文件

David J. Lipman and William R. Pearson created the FASTA format and released it in 1985. Many DNA apps have adopted support for the format because of its simplicity, making it one of the most common formats for transferring sequences between applications.

The FASTA format

FASTA files often start with a header line that may contain comments or other information. The rest of the file contains sequence data. Each sequence starts with a > character followed by the name of the sequence. The rest of the line describes the sequence, and the remaining lines contain the sequence itself.

注: Files saved in the FASTA format may use various file extensions besides .fasta, such as .fas (.FAS files) and .fa (.FA files).

如何打开 FASTA 文件

You can open a FASTA file with several DNA applications, such as GSL Biotech SnapGene (multiplatform), Genome Compiler (multiplatform), and Heracle BioSoft DNA Baser (Windows). For example, you can open a FASTA file with SnapGene by selecting File → Open Files....

Opening a FASTA file with a text editor

FASTA file open in Apple TextEdit 1
FASTA file open in Apple TextEdit 1

You can also open a FASTA file with a text editor, such as Microsoft Notepad (Windows) or Apple TextEdit (Mac). You can also open a FASTA file with source code editors. However, opening the FASTA file with a text editor or source editor will not natively display the sequence in the FASTA file like a DNA app.

When opened in a text editor or source code editor, you can view the sequence in the FASTA file and modify its properties. However, if you incorrectly edit the sequence, you may corrupt it.

如何转换 FASTA 文件

Various applications, such as GSL Biotech SnapGene and Heracle BioSoft DNA Baser, can convert FASTA files to other formats.

For example, SnapGene can convert FASTA files to the following formats:

  • .DNA - SnapGene DNA File
  • .SEQ - DNA Sequence Text File
  • .EMBL - EMBL Sequence Data File
  • .GBK - GenBank Data File
  • .TXT - Plain Text File
  • .JPG - JPEG Image
  • .PNG - Portable Network Graphic
  • .SVG - Scalable Vector Graphics File
  • .PDF - Portable Document Format
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分类: 数据
更新时间: 2022-10-13

验证者 FileInfo.com

FileInfo.com 团队 独立研究了本页面列出的 FASTA Sequence 文件格式和 Mac, Windows, and Linux 应用。 我们的目标是达到 100% 的准确率,并且仅发布我们已验证过的文件类型信息。

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